Bioinformatician - Scientific Data Manager and Research Software Engineer in Precision Oncology and Multiomics
vor 2 Monaten
Job Summary
We are seeking a highly skilled Bioinformatician and Research Software Engineer to join our team at EMBL. As a key member of our scientific data management team, you will be responsible for establishing and curating a FAIR data repository for primary and derived data from our collaborators.
Key Responsibilities
- Establish and curate a FAIR data repository for primary and derived data from INTeRCePT collaborators, using EMBL's world-class IT infrastructure.
- Data import, initial QA/QC, consistency and completeness checks, documentation and metadata.
- Create necessary conditions for dataset integration, such as identifier consistency.
- Support researchers with finding, accessing and trouble-shooting data.
- Perform data uploads to public repositories, in conjunction with scientific publications, under guidance by the researchers.
- Generate interfaces for data visualization and browsing, and perform data transformations to make them suitable for machine learning / AI methods.
- Adapt and further develop open source scientific software useful for the above tasks.
- Engage with scientific data management and research software engineering in the broader scientific community internationally, e.g., by contributing open source tools and training material.
Requirements
- A university degree in the natural or life sciences, and experience with biological data analysis. A PhD, and experience in scientific computing are an advantage.
- A passion for detail, for keeping things well-organized, and for working with others.
- Knowledge of R and Python: good in at least one, at least basic in the other.
- You enjoy creating interactive websites using tools such as shiny and quarto.
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Heidelberg, Baden-Württemberg, Deutschland EMBL VollzeitJob Title: Bioinformatician - Scientific Data Manager and Research Software Engineer in Precision Oncology and MultiomicsEMBL is seeking a highly skilled Bioinformatician - Scientific Data Manager and Research Software Engineer to join our team in Precision Oncology and Multiomics. As a key member of our team, you will be responsible for establishing and...
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Heidelberg, Baden-Württemberg, Deutschland EMBL VollzeitJob Title: Bioinformatician - Scientific Data Manager and Research Software Engineer in Precision Oncology and MultiomicsEMBL is seeking a highly skilled Bioinformatician - Scientific Data Manager and Research Software Engineer to join our team in Precision Oncology and Multiomics. As a key member of our team, you will be responsible for establishing and...
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Heidelberg, Baden-Württemberg, Deutschland EMBL VollzeitJob Title: Bioinformatician - Scientific Data Manager and Research Software Engineer in Precision Oncology and MultiomicsEMBL is seeking a highly skilled Bioinformatician - Scientific Data Manager and Research Software Engineer to join our team in Precision Oncology and Multiomics. As a key member of our team, you will be responsible for establishing and...
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Heidelberg, Baden-Württemberg, Deutschland EMBL VollzeitJob Title: Bioinformatician - Scientific Data Manager and Research Software Engineer in Precision Oncology and MultiomicsEMBL is seeking a highly skilled Bioinformatician - Scientific Data Manager and Research Software Engineer to join our team in Precision Oncology and Multiomics. As a key member of our team, you will be responsible for establishing and...
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Heidelberg, Baden-Württemberg, Deutschland EMBL VollzeitJob Title: Bioinformatician - Scientific Data Manager and Research Software Engineer in Precision Oncology and MultiomicsEMBL is seeking a highly skilled Bioinformatician - Scientific Data Manager and Research Software Engineer to join our team in Precision Oncology and Multiomics. As a key member of our team, you will be responsible for establishing and...
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