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AI Regulatory Genomics Software Engineer

vor 2 Monaten


Munich, Bayern, Deutschland Technical University of Munich Vollzeit

Senior Scientific Software Developer for AI in Regulatory Genomics

About Us

The Chair of Computational Molecular Medicine, led by Prof. Julien Gagneur, is a pioneering research group at the Technical University of Munich (TUM). Our team develops innovative computational approaches to unravel the genetic basis of gene regulation and its implications in diseases.

We are part of the European Research Council's (ERC) Synergy grant scheme and collaborate with renowned institutions to decipher the complete regulatory code of eukaryotes. Our project, EPIC, aims to understand how evolution shapes gene regulation and design novel genes and cells for biotechnological applications.

Your Role

We seek a highly skilled Senior Scientific Software Developer to join our team as a senior computational biologist. As a key member of our group, you will be responsible for ensuring a robust and scalable ecosystem for the entire project, covering:

  • Data backend design and implementation
  • Automated processing workflows, including QC and reproducibility metrics
  • APIs and packages supporting the development of new algorithms
  • Language modeling of DNA and RNA sequences and algorithms for MPRA and gene design
  • The project data portal to browse data and model outputs

You will interact closely with other postdocs and be supported by more junior colleagues, PhD candidates, Bachelor's and Master's students.

Requirements

To succeed in this role, you will need:

  • PhD degree in Computational Biology or related fields (Computer Science, Physics) or at least 3 years of experience in scientific software development
  • Experience with NGS data processing and modeling
  • Experience with deep learning frameworks
  • Scientific software development skills
  • Excellent organizational skills and good mentoring capabilities
  • Fluent English language proficiency
Benefits

We offer a competitive salary according to the TV-L (German academic salary scale), E14, the highest salary scale before group leader. The position comes with social benefits, including healthcare, pension, and unemployment insurance.

You will also have the opportunity to develop research management skills and move to an open-ended position. Our international and interdisciplinary working environment offers access to excellent colleagues and students.

Flexible working hours and home-officing policy are also available.